Open notebook science/External Links: Difference between revisions
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imported>Daniel Mietchen (brought over from http://en.wikipedia.org/w/index.php?title=Open_Notebook_Science&oldid=354343844) |
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==General== | |||
*[http://usefulchem.blogspot.com/2010/03/open-notebook-science-tips.html Open Notebook Science tips] — a [[blog post]] by [[Jean-Claude Bradley]], the initiator of Open Notebook science; see also [http://www.slideshare.net/jcbradley/science-commons-open-notebook-science-talk one of his presentations on the topic], given at the [[Science Commons Symposium – Pacific Northwest]] in February 2010 | |||
*{{CZ:Ref:Wald 2010 Scientists Embrace Openness}} | |||
==Practitioners of Open Notebook Science== | ==Practitioners of Open Notebook Science== | ||
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Jean-Claude Bradley ([http://usefulchem.wikispaces.com/All+Reactions notebook]) | Jean-Claude Bradley ([http://usefulchem.wikispaces.com/All+Reactions notebook]) | ||
Cameron Neylon ([http://biolab.isis.rl.ac.uk/projects/blog/blogs.php/blog_id/5 notebook]) | [[Cameron Neylon]] ([http://biolab.isis.rl.ac.uk/projects/blog/blogs.php/blog_id/5 notebook]) | ||
Open Notebook Science Challenge ([http://onschallenge.wikispaces.com/list+of+experiments notebook]) | [[Open Notebook Science Challenge]] ([http://onschallenge.wikispaces.com/list+of+experiments notebook]) | ||
Raf Aerts ([http://openwetware.org/wiki/User:Raf_Aerts/Notebook/Open_Coffee notebook]) | [[Raf Aerts]] ([http://openwetware.org/wiki/User:Raf_Aerts/Notebook/Open_Coffee notebook]) | ||
Alejandro Tamayo ([http://wiki.medialab-prado.es/index.php/Fruit_Computer_Laboratory Fruit Computer Laboratory] [http://wiki.medialab-prado.es/index.php/Fruit_Computer_Laboratory#Notas_de_laboratorio_.2F_Laboratory_notes notebook], [http://computadordefrutas.wordpress.com/ blog]) | [[Alejandro Tamayo]] ([http://wiki.medialab-prado.es/index.php/Fruit_Computer_Laboratory Fruit Computer Laboratory] [http://wiki.medialab-prado.es/index.php/Fruit_Computer_Laboratory#Notas_de_laboratorio_.2F_Laboratory_notes notebook], [http://computadordefrutas.wordpress.com/ blog]) | ||
Mike Lawrence ([http://www.thinkingaboutthinking.org notebook]) | [[Mike Lawrence]] ([http://www.thinkingaboutthinking.org notebook]) | ||
Andy Maloney ([http://openwetware.org/wiki/User:Andy_Maloney/Notebook/Lab_Notebook_of_Andy_Maloney notebook], [http://openwetware.org/wiki/User:Andy_Maloney/Notebook/Lab_Notebook_of_Andy_Maloney/Table_of_Contents/Table_of_Contents table of contents]), Physics Ph.D. student in [http://openwetware.org/wiki/KochLab KochLab] at the University of New Mexico. | [[Andy Maloney]] ([http://openwetware.org/wiki/User:Andy_Maloney/Notebook/Lab_Notebook_of_Andy_Maloney notebook], [http://openwetware.org/wiki/User:Andy_Maloney/Notebook/Lab_Notebook_of_Andy_Maloney/Table_of_Contents/Table_of_Contents table of contents]), Physics Ph.D. student in [http://openwetware.org/wiki/KochLab KochLab] at the University of New Mexico. | ||
Anthony Salvagno ([http://openwetware.org/wiki/User:Anthony_Salvagno/Notebook/Research notebook]), Physics Ph.D. student in [http://openwetware.org/wiki/KochLab KochLab] at the University of New Mexico. | [[Anthony Salvagno]] ([http://openwetware.org/wiki/User:Anthony_Salvagno/Notebook/Research notebook]), Physics Ph.D. student in [http://openwetware.org/wiki/KochLab KochLab] at the University of New Mexico. | ||
Larry Herskowitz ([http://openwetware.org/wiki/User:TheLarry/Notebook/Larrys_Notebook notebook]), Physics Ph.D. student in [http://openwetware.org/wiki/KochLab KochLab] at the University of New Mexico. | [[Larry Herskowitz]] ([http://openwetware.org/wiki/User:TheLarry/Notebook/Larrys_Notebook notebook]), Physics Ph.D. student in [http://openwetware.org/wiki/KochLab KochLab] at the University of New Mexico. | ||
====Theoretical==== | ====Theoretical==== | ||
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[[Stephen McIntyre]] ([http://www.climateaudit.org notebook on climate change])<br> | [[Stephen McIntyre]] ([http://www.climateaudit.org notebook on climate change])<br> | ||
Carl Boettiger, Theory and computational modeling. ([http://openwetware.org/wiki/User:Carl_Boettiger/Notebook/Stochastic_Population_Dynamics Stochastic population dynamics], [http://code.google.com/p/popdyn/ code on Google] and [http://openwetware.org/wiki/User:Carl_Boettiger/Notebook/Comparative_Phylogenetics comparative phylogenetics].) <br> | |||
[[Carl Boettiger]], Theory and computational modeling. ([http://openwetware.org/wiki/User:Carl_Boettiger/Notebook/Stochastic_Population_Dynamics Stochastic population dynamics], [http://code.google.com/p/popdyn/ code on Google] and [http://openwetware.org/wiki/User:Carl_Boettiger/Notebook/Comparative_Phylogenetics comparative phylogenetics].) <br> | |||
===Archived=== | ===Archived=== | ||
Jeremiah Faith ([http://www.jeremiahfaith.com/open_notebook_science/jeremiah_faith_lab_notebook.pdf notebook archived April 15, 2008])<br> | [[Jeremiah Faith]] ([http://www.jeremiahfaith.com/open_notebook_science/jeremiah_faith_lab_notebook.pdf notebook archived April 15, 2008])<br> | ||
[http://influenza.bio.ed.ac.uk/ Human/Swine A/H1N1 Influenza Origins and Evolution]<br> | [http://influenza.bio.ed.ac.uk/ Human/Swine A/H1N1 Influenza Origins and Evolution]<br> | ||
Linh Le ([http://openwetware.org/wiki/User:Linh_N_Le/Notebook Notebook]), undergraduate physics major and alumnus of [http://openwetware.org/wiki/KochLab KochLab] at the University of New Mexico.<br> | [[Linh Le]] ([http://openwetware.org/wiki/User:Linh_N_Le/Notebook Notebook]), undergraduate physics major and alumnus of [http://openwetware.org/wiki/KochLab KochLab] at the University of New Mexico.<br> | ||
Brigette Black ([http://openwetware.org/wiki/User:Brigette_D._Black/Notebook/Brigettes_Notebook notebook]), Physics Ph.D. student in [http://openwetware.org/wiki/KochLab KochLab] at the University of New Mexico. | |||
[[Brigette Black]] ([http://openwetware.org/wiki/User:Brigette_D._Black/Notebook/Brigettes_Notebook notebook]), Physics Ph.D. student in [http://openwetware.org/wiki/KochLab KochLab] at the University of New Mexico. | |||
===Recurrent (Educational)=== | ===Recurrent (Educational)=== | ||
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The Open Source Science Project ([http://www.theopensourcescienceproject.com Homepage]) (no lab notebooks appear to be available without login) | The Open Source Science Project ([http://www.theopensourcescienceproject.com Homepage]) (no lab notebooks appear to be available without login) | ||
==References== | |||
{{reflist}} | |||
Latest revision as of 15:56, 19 April 2010
- Please sort and annotate in a user-friendly manner and consider archiving the URLs behind the links you provide. See also related web sources.
General
- Open Notebook Science tips — a blog post by Jean-Claude Bradley, the initiator of Open Notebook science; see also one of his presentations on the topic, given at the Science Commons Symposium – Pacific Northwest in February 2010
- Chelsea Wald (2010). "Scientists Embrace Openness". Science Careers (2010-04-09). DOI:10.1126/science.caredit.a1000036. Research Blogging. [e]
- Provides an introductory overview of Open notebook science, focused on its practitioners. Covers the possibility of being scooped and exposes the benefits of open research in most of its variants: open science, open data, open access, open source.
- A lively discussion of the article is here, which broadens the subject to a comparison of open research and open journalism. Participants: The author, her editor, scientists, educators and patient advocates.
Practitioners of Open Notebook Science
Active
Experimental
Jean-Claude Bradley (notebook)
Open Notebook Science Challenge (notebook)
Alejandro Tamayo (Fruit Computer Laboratory notebook, blog)
Andy Maloney (notebook, table of contents), Physics Ph.D. student in KochLab at the University of New Mexico.
Anthony Salvagno (notebook), Physics Ph.D. student in KochLab at the University of New Mexico.
Larry Herskowitz (notebook), Physics Ph.D. student in KochLab at the University of New Mexico.
Theoretical
Stephen McIntyre (notebook on climate change)
Carl Boettiger, Theory and computational modeling. (Stochastic population dynamics, code on Google and comparative phylogenetics.)
Archived
Jeremiah Faith (notebook archived April 15, 2008)
Human/Swine A/H1N1 Influenza Origins and Evolution
Linh Le (Notebook), undergraduate physics major and alumnus of KochLab at the University of New Mexico.
Brigette Black (notebook), Physics Ph.D. student in KochLab at the University of New Mexico.
Recurrent (Educational)
Junior Physics Lab (307L) at The University of New Mexico
Partial/Pseudo[1] Open Notebooks
These are initiatives more open than traditional laboratory notebooks but lacking a key component for full Open Notebook Science. Usually either the notebook is only partially shared or shared with significant delay.
Vinod Scaria (notebook(needs login))
OpenWetWare (hosts many laboratories and allows for selective sharing of information related to each research group)
Caleb Morse (notebook)
Gus Rosania (notebook)
Antony Garrett Lisi (notebook)
Steve Koch (notebook), Principal Investigator of KochLab at the University of New Mexico. (Notebook is completely open, but some lab activities such as grant writing are not in notebook.)
Rosie Redfield (research blog), microbiologist at the University of British Columbia; all results discussed but raw experimental notebook is not exposed.
The Open Source Science Project (Homepage) (no lab notebooks appear to be available without login)